MRIQC: individual T1w report

Summary

  • BIDS filename: sub-6021_ses-2_T1w.
  • Date and time: 2022-11-11, 14:09.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.5840822978677469
cnr2.094590352658065
efc0.5835342070721589
fber1875.97265625
fwhmavg4.179703333333333
fwhmx4.08858
fwhmy4.76253
fwhmz3.688
icvscsf0.2034020594413636
icvsgm0.4273164496125706
icvswm0.36928149094606577
inumed1.961761474609375
inurange0.8375218152999875
qi10.0
qi20.004441273326399773
rpvecsf25.499632552711983
rpvegm12.99408936577249
rpvewm17.448323986171992
sizex176
sizey256
sizez256
snrcsf2.9075673001288687
snrgm9.898705840949102
snrtotal10.720869246084328
snrwm19.356334597175014
snrdcsf34.634055074971016
snrdgm79.16867279033892
snrdtotal70.97791781140181
snrdwm99.1310255688955
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk18.829110924875714
summarybgmad6.608792690453952
summarybgmean14.659393248120276
summarybgmedian13.432926129549742
summarybgn2517957.0
summarybgp054.517800267785788
summarybgp9529.275345735251904
summarybgstdv8.055495767283306
summarycsfk55.7671696770159
summarycsfmad83.6816047426399
summarycsfmean376.72469687501666
summarycsfmedian349.3765540421009
summarycsfn25824.0
summarycsfp05248.900676086545
summarycsfp95583.4588452503085
summarycsfstdv120.1587971464328
summarygmk0.46663584844091544
summarygmmad70.9105594083843
summarygmmean807.203660793403
summarygmmedian798.6266126707196
summarygmn21467.0
summarygmp05690.5186641294509
summarygmp95961.6288463324308
summarygmstdv80.67802236204432
summarywmk0.542190689910584
summarywmmad46.70808887982996
summarywmmean1000.9045415584831
summarywmmedian1000.0000299401581
summarywmn212573.0
summarywmp05914.2822995260358
summarywmp951087.3441684506834
summarywmstdv51.662553815850956
tpmoverlapcsf0.16345053911209106
tpmoverlapgm0.4449866712093353
tpmoverlapwm0.4832533299922943
wm2max0.5342867524498299
AcquisitionMatrixPE246
AcquisitionNumber1
AcquisitionTime15:10:32.865000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.7
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[-0.0347784, 0.997443, 0.0624313, -0.0208262, 0.0617322, -0.997875]
ImageOrientationTextSag>Cor(-2.1)>Tra(1.1)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling96
PhaseEncodingSteps185
PhaseResolution0.96
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0278847
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP\OSP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber14
ShimSetting[2619, 5489, -7449, 409, -143, -978, -12, -141]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp237.942
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum46c127560cc1f976ee5c2261c8f70ea5
softwaremriqc
version0.16.1
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.